I would try to set up both derailleurs from scratch. For me autotrim works great. One of my main complaints about ltwoo was that I could never get rid of the fd rubbing even when using trim manually. Manual trim actually would trim in the wrong direction on some gears which was super annoying. Auto trim definitely works differently and does not follow same trim positions as in manual.
In my case, manual trimming works better than the automatic one (the chain has never dropped once and I never noticed any chain rub), so I think I'll disable it. Yesterday, during a sprint, when I wanted to use the hardest gear combination, my chain dropped, so...
The main problem now is skipping chain in this one gear on RD. I think it's a matter of fine adjustment (micro-adjustment), but it's difficult because it mainly happens while driving, most often over bumps and under load. When the vehicle is stationary, I can't reproduce the issue.