My brake calipers were already connected to the hoses, so I didn't want to disconnect those. I ran my rear brake from back to front (afterwards I realized that the brakes were pre-bled so I am glad I did it that way) and slid the foam tubing on from the front of the frame down the downtube. *By pre-bled I mean that they already had fluid in them, so when I cut them to size and inserted the fitting, I didn't need to bleed the brakes.
The front brake hose I sent up from the bottom and added electrical tape around the steerer to keep that in place.
The rear derailleur I ran from the back to front as well (and slid the foam tube on after).
The front derailleur was the most difficult. Had to run that down the downtube and get it to seat into the frame mount for the cable housing down by the bottom bracket. It was difficult to get that lined up without seeing it.
Once all of those were in place and poking out where the bars connect, I slid all of the spacer rings over the hoses/cables, ran the hoses and cables through the bars, cut to size, connected, and was done (I realize that probably sounds like it went smoothly...I did have to redo it once I realized I forgot the headset spacers the first time

).